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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142004339_142009937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142004339 - 142009937

Intron Length:

5599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGTTTTTCAACC

Flanking Amino Acid:

VCGHCGNTFLWMELRFNTLA

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

31.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

37.6

-1.4

2.8

48.3

41.8

Minor BPS

0.35

1.5

69.41

35.8

Associated Gene:

Gene:

PIP4P2

Ensembl Gene ID:

ENSAPLG00000012413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012935

141995290 - 142016851

21562