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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142050763_142051791_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

142050763 - 142051791

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TACAATGATTTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTACAATGATT

Flanking Amino Acid:

EFWENSNAWNSHLQTNYSKT

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

58.7

0.2

55.2

44.3

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

51.5

0.13

1.9

78.44

37.4

Associated Gene:

Gene:

NECAB1

Ensembl Gene ID:

ENSAPLG00000012515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026452

142048588 - 142108389

59802

ENSAPLT00000013049

142048588 - 142107959

59372

ENSAPLT00000040662

142048588 - 142108389

59802