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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142054060_142055234_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142054060 - 142055234

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ATTTTTGCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTTATTAATT

Flanking Amino Acid:

EEVLEENARSHIMIVQRQMS

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

74.8

0.56

70.5

39.5

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

71.8

0.76

1.5

86.09

33.4

Associated Gene:

Gene:

NECAB1

Ensembl Gene ID:

ENSAPLG00000012515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033646

142048588 - 142108389

59802

ENSAPLT00000026452

142048588 - 142108389

59802

ENSAPLT00000013049

142048588 - 142107959

59372

ENSAPLT00000040662

142048588 - 142108389

59802