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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142055289_142057789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142055289 - 142057789

Intron Length:

2501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCCTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTT

Flanking Amino Acid:

QKLIDRLEKKDLKLEPFEEE

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

79.6

35.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

60.8

0.24

1.2

65.2

40.9

Minor 5ss

-0.4

2.8

65.5

45.8

Minor BPS

63.6

0.51

1.5

78.46

Associated Gene:

Gene:

NECAB1

Ensembl Gene ID:

ENSAPLG00000012515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033646

142048588 - 142108389

59802

ENSAPLT00000026452

142048588 - 142108389

59802

ENSAPLT00000013049

142048588 - 142107959

59372

ENSAPLT00000040662

142048588 - 142108389

59802