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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142057867_142058947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142057867 - 142058947

Intron Length:

1081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TAATATTTTACT

Flanking Amino Acid:

LSPNSPHFNTGWTEEDSQWM

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

62.2

0.27

1.1

63.5

41.3

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

56.4

0.28

1.8

75.03

41.4

Associated Gene:

Gene:

NECAB1

Ensembl Gene ID:

ENSAPLG00000012515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040662

142048588 - 142108389

59802

ENSAPLT00000033646

142048588 - 142108389

59802

ENSAPLT00000026452

142048588 - 142108389

59802

ENSAPLT00000013049

142048588 - 142107959

59372