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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142061058_142076495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142061058 - 142076495

Intron Length:

15438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTCAATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

ILKAMDKTKKDYQEASNLEQ

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

0.9

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

NECAB1

Ensembl Gene ID:

ENSAPLG00000012515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026452

142048588 - 142108389

59802

ENSAPLT00000013049

142048588 - 142107959

59372

ENSAPLT00000040662

142048588 - 142108389

59802

ENSAPLT00000033646

142048588 - 142108389

59802