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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142144086_142149638_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142144086 - 142149638

Intron Length:

5553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

PFGLQNAVFAVTDLSLPSYL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

TMEM64

Ensembl Gene ID:

ENSAPLG00000012726

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013249

142143372 - 142153452

10081