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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142463068_142463410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142463068 - 142463410

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGGT

U12 Branch Point Sequence:

TTGTCTTTTTTT

Flanking Amino Acid:

GLNSSIIAASRLFYVGAREG

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

38.1

-0.7

4.3

71.4

45.1

Major PPT

85.7

0.8

0.7

84.8

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

43.4

-0.4

3.5

74.98

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007025

142458892 - 142477985

19094