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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142493295_142496390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142493295 - 142496390

Intron Length:

3096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CATTCAGCAAAT

Flanking Amino Acid:

QNPDERPSFLKCLIDLEPVL

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

84.1

0.77

0.8

84.8

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

42.5

-0.4

2.4

64.17

45.4

Associated Gene:

Gene:

RIPK2

Ensembl Gene ID:

ENSAPLG00000006833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007127

142485340 - 142507174

21835