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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142662594_142695364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142662594 - 142695364

Intron Length:

32771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCAATCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTTTTTTTAACC

Flanking Amino Acid:

LSKFLLQRDDRMSWHQKNLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

60.5

0.24

59.8

35.5

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

78.8

0.88

1.1

81.25

33.5

Associated Gene:

Gene:

SLC30A8

Ensembl Gene ID:

ENSAPLG00000014913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020342

142662212 - 142714392

52181