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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142707985_142708988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142707985 - 142708988

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTGATTATTT

Flanking Amino Acid:

QTILSAHVATADTDDSQKVL

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

80.7

33.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

81.3

0.7

0.8

76.6

32.2

Minor 5ss

31.4

-2.1

2.4

35.4

40.5

Minor BPS

49.1

0.01

2.2

75.4

41.6

Associated Gene:

Gene:

SLC30A8

Ensembl Gene ID:

ENSAPLG00000014913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045392

142685210 - 142714392

29183

ENSAPLT00000020342

142662212 - 142714392

52181

ENSAPLT00000015548

142683482 - 142714392

30911