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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142726508_142752025_R

Intron Information:

Intron Rank:

142791

Intron Class:

major

Intron Phase:

Intron Coordinates:

142726508 - 142752025

Intron Length:

25518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TCATCATTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

80.5

0.69

0.8

73.8

36.9

Minor 5ss

43.8

-0.7

2.8

58.6

45.8

Minor BPS

58.3

0.34

2.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029049

142724960 - 142752401

27442