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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142791366_142795547_R

Intron Information:

Intron Rank:

131098

Intron Class:

major

Intron Phase:

Intron Coordinates:

142791366 - 142795547

Intron Length:

4182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTATATGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

AGTGACTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.8

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

66.8

0.38

1.1

62.3

42.9

Minor 5ss

38.4

-1.3

45.7

43.4

Minor BPS

52.8

0.16

1.9

72.33

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020072

142791009 - 142796437

5429