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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142907089_142910721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142907089 - 142910721

Intron Length:

3633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTGGTATTCATT

Flanking Amino Acid:

DEDTVLSTTEVDFAFTVWQS

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.9

31.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

78.6

0.64

0.8

72.3

32.4

Minor 5ss

33.8

-1.8

3.7

49.2

47.3

Minor BPS

46.6

-0.1

2.1

67.84

43.8

Associated Gene:

Gene:

EXT1

Ensembl Gene ID:

ENSAPLG00000009944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022492

142903180 - 143065872

162693

ENSAPLT00000010361

142903180 - 143065872

162693

ENSAPLT00000042188

142904603 - 143065872

161270