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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142910812_142913546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142910812 - 142913546

Intron Length:

2735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TGGATGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

CTTTAAATGATT

Flanking Amino Acid:

PVIVIEGESKVMSSRFLPYD

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

62.3

0.28

53.9

41.5

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

46.4

-0.2

70.28

40.6

Associated Gene:

Gene:

EXT1

Ensembl Gene ID:

ENSAPLG00000009944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022492

142903180 - 143065872

162693

ENSAPLT00000010361

142903180 - 143065872

162693

ENSAPLT00000042188

142904603 - 143065872

161270