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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142914490_142915797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142914490 - 142915797

Intron Length:

1308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTGTTTTTACT

Flanking Amino Acid:

GDFPYYYANLGLKPLPTFTA

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

78.2

0.63

0.8

72.5

32.2

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

63.1

0.49

1.7

82.93

38.6

Associated Gene:

Gene:

EXT1

Ensembl Gene ID:

ENSAPLG00000009944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042188

142904603 - 143065872

161270

ENSAPLT00000022492

142903180 - 143065872

162693

ENSAPLT00000010361

142903180 - 143065872

162693