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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142915931_142920768_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142915931 - 142920768

Intron Length:

4838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

GGCTATTTAACA

Flanking Amino Acid:

VEKIVLTTLEIIQDRIFKHI

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

79.5

0.73

0.9

36.9

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

61.5

0.36

1.5

65.83

40.4

Associated Gene:

Gene:

EXT1

Ensembl Gene ID:

ENSAPLG00000009944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042188

142904603 - 143065872

161270

ENSAPLT00000010361

142903180 - 143065872

162693