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Intron Name: Anas_platyrhynchos_platyrhynchos_2_142927612_143064363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142927612 - 143064363

Intron Length:

136752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

GCTAATTGAATT

Flanking Amino Acid:

RCDKDNTEYEKYDYREMLHN

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

71.6

40.1

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

72.5

0.51

73.4

37.1

Minor 5ss

35.3

-1.7

2.9

41.6

Minor BPS

48.4

-0

1.6

63.29

Associated Gene:

Gene:

EXT1

Ensembl Gene ID:

ENSAPLG00000009944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042188

142904603 - 143065872

161270

ENSAPLT00000022492

142903180 - 143065872

162693

ENSAPLT00000010361

142903180 - 143065872

162693