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Intron Name: Anas_platyrhynchos_platyrhynchos_2_14302079_14305604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14302079 - 14305604

Intron Length:

3526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTAATCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

QAQRQYSSLPRQSRKNASSV

Intron Amino Acid Position:

1218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

67.5

39.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.3

0.79

0.9

78.8

38.6

Minor 5ss

36.2

-1.6

3.2

46.5

48.8

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

PARD3

Ensembl Gene ID:

ENSAPLG00000014767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015447

13864772 - 14305998

441227

ENSAPLT00000041564

13864772 - 14307028

442257

ENSAPLT00000003606

13864772 - 14305998

441227

ENSAPLT00000038237

13864772 - 14307028

442257

ENSAPLT00000003604

13864772 - 14305998

441227

ENSAPLT00000021470

13864772 - 14307028

442257

ENSAPLT00000019870

13864772 - 14307028

442257

ENSAPLT00000047719

13864772 - 14307028

442257