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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143093803_143171928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143093803 - 143171928

Intron Length:

78126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TGTTTTTTTTCT

Flanking Amino Acid:

EVRNLQLLTQAPAESSP*

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

43.2

-0.4

3.5

75.76

41.1

Associated Gene:

Gene:

SAMD12

Ensembl Gene ID:

ENSAPLG00000009933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010343

143093780 - 143254167

160388