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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143237371_143237737_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143237371 - 143237737

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTTGGTAACT

Flanking Amino Acid:

KQQVEPEISKVKEEKGLNVW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.9

33.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

69.1

0.43

1.1

66.1

39.5

Minor 5ss

31.4

-2.1

2.7

33.6

35.4

Minor BPS

55.2

0.24

2.6

86.99

39.2

Associated Gene:

Gene:

SAMD12

Ensembl Gene ID:

ENSAPLG00000009933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010343

143093780 - 143254167

160388