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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143348012_143352366_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

143348012 - 143352366

Intron Length:

4355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTATATTGA

5'SS Class:

weak_major

3'SS Sequence:

ACATACACACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

ATCTGTCTAACA

Flanking Amino Acid:

DIAKKINQGTHTHLHSHIPN

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.9

0.05

1.3

52.2

41.4

Major BPS

79.7

0.74

79.6

35.6

Major PPT

47.7

-0.1

1.1

40.6

37.3

Minor 5ss

46.9

-0.3

2.6

61.2

44.1

Minor BPS

49.7

-0

2.1

65.95

40.8

Associated Gene:

Gene:

TNFRSF11B

Ensembl Gene ID:

ENSAPLG00000009749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010148

143347889 - 143356813

8925