Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143451574_143456565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143451574 - 143456565

Intron Length:

4992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGATGT

5'SS Class:

major

3'SS Sequence:

CTTTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGAAT

U12 Branch Point Sequence:

ACAGACTGAATC

Flanking Amino Acid:

NRIAVNWNQTDFLFHGATFV

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.6

Major BPS

53.2

0.08

1.4

63.6

40.3

Major PPT

87.1

0.84

0.7

84.4

30.5

Minor 5ss

41.9

-0.9

3.2

62.1

43.3

Minor BPS

46.7

-0.2

1.7

51.47

39.5

Associated Gene:

Gene:

MAL2

Ensembl Gene ID:

ENSAPLG00000018801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040012

143449201 - 143461104

11904