Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143533248_143534562_R

Intron Information:

Intron Rank:

145539

Intron Class:

major

Intron Phase:

Intron Coordinates:

143533248 - 143534562

Intron Length:

1315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TTGTATTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

81.2

0.7

0.9

37.6

Minor 5ss

31.1

-2.2

3.2

41.7

Minor BPS

56.3

0.19

71.81

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046437

143530976 - 143534718

3743