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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143567499_143568375_R

Intron Information:

Intron Rank:
18
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
143567499 - 143568375
Intron Length:
877

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GTG|GTAAGCTAC
5'SS Class:
strong_major
3'SS Sequence:
GGTGTTTTCCTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CATTAAT
U12 Branch Point Sequence:
CCATCATTAATT
Flanking Amino Acid:
ENIELYNVMCDLLGLKPAPN
Intron Amino Acid Position:
568

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82
0.75
1
71.1
35.6
Major BPS
79.4
0.73
0.9
79.6
29.1
Major PPT
70
0.45
0.9
61.7
44.5
Minor 5ss
44.3
-0.6
2.9
55.7
43.3
Minor BPS
63.6
0.5
1.6
73.75
43.3

Associated Gene:

Gene:
ENPP2
Ensembl Gene ID:
ENSAPLG00000006897
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000047137
143553975 - 143625879
71905
ENSAPLT00000007280
143553975 - 143611645
57671
ENSAPLT00000042410
143553975 - 143611805
57831
ENSAPLT00000023808
143553975 - 143625879
71905
ENSAPLT00000047212
143553975 - 143627038
73064
ENSAPLT00000020544
143553975 - 143611416
57442