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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143571503_143572298_R

Intron Information:

Intron Rank:
15
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
143571503 - 143572298
Intron Length:
796

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACA|GTAAGTATT
5'SS Class:
strong_major
3'SS Sequence:
ATTTCTTTTTCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TAACCAT
U12 Branch Point Sequence:
TTGTCTGTAACC
Flanking Amino Acid:
DPKVIVANLTCRKPDQHFKP
Intron Amino Acid Position:
467

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
80.5
0.72
1
85
32.3
Major BPS
57.8
0.19
1.3
67.1
39.2
Major PPT
90.7
0.92
0.7
89
27.2
Minor 5ss
43.9
-0.7
2.9
66.1
38.6
Minor BPS
64.9
0.45
2
77.71
38.7

Associated Gene:

Gene:
ENPP2
Ensembl Gene ID:
ENSAPLG00000006897
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000042410
143553975 - 143611805
57831
ENSAPLT00000023808
143553975 - 143625879
71905
ENSAPLT00000020544
143553975 - 143611416
57442
ENSAPLT00000047212
143553975 - 143627038
73064
ENSAPLT00000007280
143553975 - 143611645
57671
ENSAPLT00000047137
143553975 - 143625879
71905