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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143580331_143584937_R

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
143580331 - 143584937
Intron Length:
4607

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTTAGTACA
5'SS Class:
strong_major
3'SS Sequence:
CCTGTCAGTACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAG
U12 Branch Point Sequence:
TTTTTCTGAGTC
Flanking Amino Acid:
GHRYGPFNSEESSYGSPLTT
Intron Amino Acid Position:
325

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84.8
0.82
1.1
81.8
31.1
Major BPS
67.4
0.43
1.5
65.3
43.7
Major PPT
68.2
0.41
1
61.2
39
Minor 5ss
32.4
-2
2.4
35.7
40.3
Minor BPS
61.2
0.33
1.7
74.85
35.9

Associated Gene:

Gene:
ENPP2
Ensembl Gene ID:
ENSAPLG00000006897
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000047137
143553975 - 143625879
71905
ENSAPLT00000020544
143553975 - 143611416
57442
ENSAPLT00000007280
143553975 - 143611645
57671
ENSAPLT00000047212
143553975 - 143627038
73064