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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143585766_143587879_R

Intron Information:

Intron Rank:
9
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
143585766 - 143587879
Intron Length:
2114

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGT|GTAAGTGCC
5'SS Class:
major
3'SS Sequence:
TTTTGTGGTCTAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTACAT
U12 Branch Point Sequence:
ATATATTTACAT
Flanking Amino Acid:
GVKAGTFFWSVVIPHERRIL
Intron Amino Acid Position:
278

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
73.5
0.55
1.1
68.5
37.9
Major BPS
82.7
0.81
0.9
89.3
26.1
Major PPT
72.7
0.51
1
65.8
45.3
Minor 5ss
35.9
-1.6
3.2
45.9
42.3
Minor BPS
49.3
0.03
1.8
69.57
40.9

Associated Gene:

Gene:
ENPP2
Ensembl Gene ID:
ENSAPLG00000006897
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000042410
143553975 - 143611805
57831
ENSAPLT00000023808
143553975 - 143625879
71905
ENSAPLT00000020544
143553975 - 143611416
57442
ENSAPLT00000047212
143553975 - 143627038
73064
ENSAPLT00000007280
143553975 - 143611645
57671
ENSAPLT00000047137
143553975 - 143625879
71905