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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143587936_143596861_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
143587936 - 143596861
Intron Length:
8926

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CCA|GTAAGTTTC
5'SS Class:
major
3'SS Sequence:
TTTTCCTCATTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTAAT
U12 Branch Point Sequence:
TTTTCCTCATTA
Flanking Amino Acid:
FNHRWWGGQPIWITAAKQGV
Intron Amino Acid Position:
260

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.3
0.67
1
76.3
34
Major BPS
94.5
1.11
0.6
92.2
14.6
Major PPT
78.7
0.65
0.8
79.4
27.8
Minor 5ss
47
-0.3
2.8
67.3
37.5
Minor BPS
65.5
0.48
1.8
79.68
36.8

Associated Gene:

Gene:
ENPP2
Ensembl Gene ID:
ENSAPLG00000006897
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023808
143553975 - 143625879
71905
ENSAPLT00000020544
143553975 - 143611416
57442
ENSAPLT00000047212
143553975 - 143627038
73064
ENSAPLT00000007280
143553975 - 143611645
57671
ENSAPLT00000047137
143553975 - 143625879
71905
ENSAPLT00000042410
143553975 - 143611805
57831