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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143670934_143672537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143670934 - 143672537

Intron Length:

1604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTATCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTGTGTTTAAAT

Flanking Amino Acid:

IKYNDNRKNKFSDNYYRAEL

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.1

0.61

0.9

70.5

40.3

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

62.7

0.48

1.9

80.75

41.3

Associated Gene:

Gene:

TAF2

Ensembl Gene ID:

ENSAPLG00000007663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031732

143648440 - 143703454

55015

ENSAPLT00000008007

143649216 - 143703454

54239