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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143681959_143683430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143681959 - 143683430

Intron Length:

1472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTATCATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATCATTT

Flanking Amino Acid:

NRISMEFMLQVFNKLLSLAS

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.9

0.69

0.8

78.9

34.1

Minor 5ss

-1.6

3.1

50.1

46.4

Minor BPS

49.6

0.05

76.97

39.9

Associated Gene:

Gene:

TAF2

Ensembl Gene ID:

ENSAPLG00000007663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031732

143648440 - 143703454

55015

ENSAPLT00000008007

143649216 - 143703454

54239