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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143689915_143691249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143689915 - 143691249

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

AGTGCCATAATT

Flanking Amino Acid:

FFGCFISRMSWSDEWVLKGI

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

86.2

29.2

Major BPS

82.1

0.8

71.6

36.4

Major PPT

84.3

0.77

0.8

80.1

Minor 5ss

38.5

-1.3

2.8

49.8

40.3

Minor BPS

60.2

0.4

1.7

76.25

40.3

Associated Gene:

Gene:

TAF2

Ensembl Gene ID:

ENSAPLG00000007663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031732

143648440 - 143703454

55015

ENSAPLT00000008007

143649216 - 143703454

54239