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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143691364_143691929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143691364 - 143691929

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TATGGCGGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTGTTACTC

Flanking Amino Acid:

VAAYASMSIFSTNLLHSAMI

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

Major BPS

96.5

1.15

0.6

34.2

Major PPT

61.1

0.25

1.1

50.6

47.7

Minor 5ss

-1.4

2.8

51.9

44.6

Minor BPS

49.4

-0

2.2

67.6

38.8

Associated Gene:

Gene:

TAF2

Ensembl Gene ID:

ENSAPLG00000007663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031732

143648440 - 143703454

55015

ENSAPLT00000008007

143649216 - 143703454

54239