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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143692115_143692873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143692115 - 143692873

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATCAATC

Flanking Amino Acid:

EILVDPYMHEVTHFCLPQLL

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

87.2

27.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

88.9

0.87

0.6

85.2

22.1

Minor 5ss

40.4

-1.1

2.8

54.5

42.7

Minor BPS

0.32

1.8

73.54

36.9

Associated Gene:

Gene:

TAF2

Ensembl Gene ID:

ENSAPLG00000007663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031732

143648440 - 143703454

55015

ENSAPLT00000008007

143649216 - 143703454

54239