Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143693610_143694931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143693610 - 143694931

Intron Length:

1322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAGTAA

5'SS Class:

major

3'SS Sequence:

CTTGGTGCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TATATATTTACT

Flanking Amino Acid:

VPSELWKHVDELKVLKVHIN

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

65.5

36.5

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

72.4

0.5

64.6

41.5

Minor 5ss

35.9

-1.6

3.4

46.5

48.9

Minor BPS

51.6

0.13

1.9

74.9

41.4

Associated Gene:

Gene:

TAF2

Ensembl Gene ID:

ENSAPLG00000007663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031732

143648440 - 143703454

55015

ENSAPLT00000008007

143649216 - 143703454

54239