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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143695051_143701082_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143695051 - 143701082

Intron Length:

6032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

CTATTTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TATACTTTAAGA

Flanking Amino Acid:

TLEVCHHESKQRNLNYFSNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

34.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

75.8

0.58

72.4

37.6

Minor 5ss

36.5

-1.5

3.4

54.7

43.6

Minor BPS

0.47

1.6

73.19

38.6

Associated Gene:

Gene:

TAF2

Ensembl Gene ID:

ENSAPLG00000007663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031732

143648440 - 143703454

55015

ENSAPLT00000008007

143649216 - 143703454

54239