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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143701244_143701869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143701244 - 143701869

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGATTTATGT

Flanking Amino Acid:

NINFQRKSVVGYVELTIFPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

77.3

0.61

0.8

72.7

37.3

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

47.7

-0

2.1

72.15

45.1

Associated Gene:

Gene:

TAF2

Ensembl Gene ID:

ENSAPLG00000007663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031732

143648440 - 143703454

55015

ENSAPLT00000008007

143649216 - 143703454

54239