Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143768473_143781819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143768473 - 143781819

Intron Length:

13347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGACAC

5'SS Class:

major

3'SS Sequence:

TTTCCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCACAT

U12 Branch Point Sequence:

TCACATCTATCC

Flanking Amino Acid:

RLLEHGIIQHVSNKHHFMDS

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

62.5

38.1

Major BPS

68.9

0.47

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

27.3

-2.6

34.5

41.3

Minor BPS

41.7

-0.6

1.9

50.37

39.9

Associated Gene:

Gene:

DEPTOR

Ensembl Gene ID:

ENSAPLG00000008162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042322

143731607 - 143787621

56015

ENSAPLT00000008488

143731607 - 143805112

73506