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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143828844_143834402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143828844 - 143834402

Intron Length:

5559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGAGTTTAAAA

Flanking Amino Acid:

AYSISDAQGQVSPPTRLRYN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

76.1

0.59

0.8

69.2

30.1

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

51.4

0.04

1.9

41.5

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000008884

143824288 - 143949881

125594