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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143834520_143838428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143834520 - 143838428

Intron Length:

3909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACCAA

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

TTTTCTGTTACA

Flanking Amino Acid:

GYKLLVTPSSGGKTNQLILQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

67.5

39.6

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

88.8

0.87

0.8

83.7

31.3

Minor 5ss

36.5

-1.5

3.1

48.3

Minor BPS

57.4

0.23

2.3

78.96

37.6

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955