Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_143841747_143863855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143841747 - 143863855

Intron Length:

22109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGATCA

5'SS Class:

major

3'SS Sequence:

TAATGATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCATTTTAATG

Flanking Amino Acid:

KTNASKPAPEGSLFTCKTPA

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.3

71.4

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.7

0.53

65.8

44.1

Minor 5ss

33.6

-1.9

2.9

40.4

45.2

Minor BPS

62.4

0.25

1.4

62.86

40.1

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000008884

143824288 - 143949881

125594