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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143866581_143868026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143866581 - 143868026

Intron Length:

1446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTAACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTGTTTCTAACC

Flanking Amino Acid:

RVEEQEKEIKGTIVASLGAP

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

76.4

34.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.38

0.9

59.9

40.7

Minor 5ss

-2.4

2.7

32.5

42.4

Minor BPS

63.4

0.4

1.6

74.22

36.8

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827