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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143868179_143869212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143868179 - 143869212

Intron Length:

1034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

TTCTTCTAAACA

Flanking Amino Acid:

YPTRGGQPEEVVVDGSVSTT

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

70.6

36.1

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

76.7

0.6

0.9

73.9

34.6

Minor 5ss

37.4

-1.4

48.4

47.1

Minor BPS

69.4

0.61

1.6

78.35

38.8

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955