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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143875363_143878475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143875363 - 143878475

Intron Length:

3113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGGGTAGC

5'SS Class:

major

3'SS Sequence:

TTTCCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

AAACCCATGATT

Flanking Amino Acid:

SDPLTGQETTLPLSPPANLR

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

63.1

43.4

Major BPS

62.7

0.32

1.4

63.4

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

30.6

-2.2

2.9

34.4

Minor BPS

50.8

0.1

1.6

65.92

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955