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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143894988_143896887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143894988 - 143896887

Intron Length:

1900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTGATT

Flanking Amino Acid:

AYRVVLESLVDGKKQEVNLG

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.4

32.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.1

0.81

0.8

78.1

40.1

Minor 5ss

40.1

-1.1

2.8

44.3

43.6

Minor BPS

0.77

1.1

82.75

32.3

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955