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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143897035_143898934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143897035 - 143898934

Intron Length:

1900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTCTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTCCTTTTATT

Flanking Amino Acid:

GPAVSIMETTLPFPTQPPTS

Intron Amino Acid Position:

1008

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

81.4

26.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.5

0.62

76.2

37.8

Minor 5ss

-2.1

2.7

37.8

40.1

Minor BPS

61.1

0.43

1.6

76.99

39.9

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594