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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143899010_143900321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143899010 - 143900321

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GTTGCTCTAATT

Flanking Amino Acid:

PPPTIPPAKEVCKAAKADLA

Intron Amino Acid Position:

1033

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

82.2

0.8

0.9

81.6

Major PPT

87.7

0.85

0.7

80.8

31.1

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

58.5

0.35

1.8

77.07

39.9

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827