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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143900462_143901379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143900462 - 143901379

Intron Length:

918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAATAATGAACA

Flanking Amino Acid:

LDKIGPDGTQVAIIQFSDDP

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

0.75

78.6

Major PPT

70.3

0.46

64.6

40.5

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

49.8

-0

1.9

65.57

39.4

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594