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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143910920_143912546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143910920 - 143912546

Intron Length:

1627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTACTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTTCTTTTACT

Flanking Amino Acid:

RKIFYGSFHKLHVVISKTTA

Intron Amino Acid Position:

1368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

88.2

26.7

Major BPS

84.4

0.85

34.5

Major PPT

80.1

0.68

0.8

81.2

29.7

Minor 5ss

33.8

-1.9

2.6

42.8

44.1

Minor BPS

80.4

1.04

1.5

96.11

29.5

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827