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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143922909_143924121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143922909 - 143924121

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGACTC

5'SS Class:

major

3'SS Sequence:

TCTTAATCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGATTCTTAATC

Flanking Amino Acid:

PSGLSIQGLPGPPGEKGEKG

Intron Amino Acid Position:

1526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

39.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

70.6

0.46

66.4

39.4

Minor 5ss

33.3

-1.9

3.3

48.4

41.4

Minor BPS

75.3

0.77

1.1

75.67

34.4

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955